{
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  "Title": "'REST' 'API' Client for the 'NHGRI'-'EBI' 'GWAS' Catalog",
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  "Description": "'GWAS' R 'API' Data Download. This package provides easy\naccess to the 'NHGRI'-'EBI' 'GWAS' Catalog data by accessing\nthe 'REST' 'API' <https://www.ebi.ac.uk/gwas/rest/docs/api/>.",
  "License": "MIT + file LICENSE",
  "URL": "https://github.com/ramiromagno/gwasrapidd,\nhttps://rmagno.eu/gwasrapidd/",
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  "Repository": "https://patterninstitute.r-universe.dev",
  "Date/Publication": "2025-05-27 10:52:42 UTC",
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    "association_to_trait",
    "association_to_variant",
    "bind",
    "exists_variant",
    "get_associations",
    "get_child_efo",
    "get_metadata",
    "get_studies",
    "get_traits",
    "get_variants",
    "intersect",
    "is_ebi_reachable",
    "n",
    "open_in_dbsnp",
    "open_in_gtex",
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    "open_in_pubmed",
    "setdiff",
    "setequal",
    "study_to_association",
    "study_to_trait",
    "study_to_variant",
    "trait_to_association",
    "trait_to_study",
    "trait_to_variant",
    "union",
    "variant_to_association",
    "variant_to_study",
    "variant_to_trait",
    "write_xlsx"
  ],
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      "name": "associations_ex01",
      "title": "gwasrapidd entities' examples",
      "object": "associations_ex01",
      "class": [
        "associations"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "associations_ex02",
      "title": "gwasrapidd entities' examples",
      "object": "associations_ex02",
      "class": [
        "associations"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "cytogenetic_bands",
      "title": "GRCh38 human cytogenetic bands.",
      "object": "cytogenetic_bands",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "cytogenetic_band",
        "chromosome",
        "start",
        "end",
        "length",
        "assembly",
        "stain",
        "last_download_date"
      ],
      "rows": 862,
      "table": true,
      "tojson": true
    },
    {
      "name": "studies_ex01",
      "title": "gwasrapidd entities' examples",
      "object": "studies_ex01",
      "class": [
        "studies"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
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      "title": "gwasrapidd entities' examples",
      "object": "studies_ex02",
      "class": [
        "studies"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "traits_ex01",
      "title": "gwasrapidd entities' examples",
      "object": "traits_ex01",
      "class": [
        "traits"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "traits_ex02",
      "title": "gwasrapidd entities' examples",
      "object": "traits_ex02",
      "class": [
        "traits"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "variants_ex01",
      "title": "gwasrapidd entities' examples",
      "object": "variants_ex01",
      "class": [
        "variants"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "variants_ex02",
      "title": "gwasrapidd entities' examples",
      "object": "variants_ex02",
      "class": [
        "variants"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    }
  ],
  "_help": [
    {
      "page": "pipe",
      "title": "Pipe operator",
      "topics": [
        "%>%"
      ]
    },
    {
      "page": "association_to_study",
      "title": "Map an association id to a study id",
      "topics": [
        "association_to_study"
      ]
    },
    {
      "page": "association_to_trait",
      "title": "Map an association id to an EFO trait id",
      "topics": [
        "association_to_trait"
      ]
    },
    {
      "page": "association_to_variant",
      "title": "Map an association id to a variant id",
      "topics": [
        "association_to_variant"
      ]
    },
    {
      "page": "associations-class",
      "title": "An S4 class to represent a set of GWAS Catalog associations",
      "topics": [
        "associations-class"
      ]
    },
    {
      "page": "bind",
      "title": "Bind GWAS Catalog objects",
      "topics": [
        "bind"
      ]
    },
    {
      "page": "cytogenetic_bands",
      "title": "GRCh38 human cytogenetic bands.",
      "topics": [
        "cytogenetic_bands"
      ]
    },
    {
      "page": "exists_variant",
      "title": "Check if a variant exists in the Catalog.",
      "topics": [
        "exists_variant"
      ]
    },
    {
      "page": "gc_examples",
      "title": "gwasrapidd entities' examples",
      "topics": [
        "associations_ex01",
        "associations_ex02",
        "gc_examples",
        "studies_ex01",
        "studies_ex02",
        "traits_ex01",
        "traits_ex02",
        "variants_ex01",
        "variants_ex02"
      ]
    },
    {
      "page": "get_associations",
      "title": "Get GWAS Catalog associations",
      "topics": [
        "get_associations"
      ]
    },
    {
      "page": "get_child_efo",
      "title": "Get all child terms of this trait in the EFO hierarchy",
      "topics": [
        "get_child_efo"
      ]
    },
    {
      "page": "get_metadata",
      "title": "Get GWAS Catalog metadata",
      "topics": [
        "get_metadata"
      ]
    },
    {
      "page": "get_studies",
      "title": "Get GWAS Catalog studies",
      "topics": [
        "get_studies"
      ]
    },
    {
      "page": "get_traits",
      "title": "Get GWAS Catalog EFO traits",
      "topics": [
        "get_traits"
      ]
    },
    {
      "page": "get_variants",
      "title": "Get GWAS Catalog variants",
      "topics": [
        "get_variants"
      ]
    },
    {
      "page": "is_ebi_reachable",
      "title": "Is the GWAS Catalog REST API server reachable?",
      "topics": [
        "is_ebi_reachable"
      ]
    },
    {
      "page": "n",
      "title": "Number of GWAS Catalog entities",
      "topics": [
        "n",
        "n,associations-method",
        "n,studies-method",
        "n,traits-method",
        "n,variants-method"
      ]
    },
    {
      "page": "open_in_dbsnp",
      "title": "Browse dbSNP from SNP identifiers.",
      "topics": [
        "open_in_dbsnp"
      ]
    },
    {
      "page": "open_in_gtex",
      "title": "Browse GTEx from SNP identifiers.",
      "topics": [
        "open_in_gtex"
      ]
    },
    {
      "page": "open_in_gwas_catalog",
      "title": "Browse GWAS Catalog entities from the GWAS Web Graphical User Interface",
      "topics": [
        "open_in_gwas_catalog"
      ]
    },
    {
      "page": "open_in_pubmed",
      "title": "Browse PubMed from PubMed identifiers.",
      "topics": [
        "open_in_pubmed"
      ]
    },
    {
      "page": "setop",
      "title": "Set operations on GWAS Catalog objects.",
      "topics": [
        "intersect",
        "setdiff",
        "setequal",
        "setop",
        "union"
      ]
    },
    {
      "page": "studies-class",
      "title": "An S4 class to represent a set of GWAS Catalog studies",
      "topics": [
        "studies-class"
      ]
    },
    {
      "page": "study_to_association",
      "title": "Map a study id to an association id",
      "topics": [
        "study_to_association"
      ]
    },
    {
      "page": "study_to_trait",
      "title": "Map a study id to a EFO trait id",
      "topics": [
        "study_to_trait"
      ]
    },
    {
      "page": "study_to_variant",
      "title": "Map a study id to a variant id",
      "topics": [
        "study_to_variant"
      ]
    },
    {
      "page": "subset-associations",
      "title": "Subset an associations object",
      "topics": [
        "subset-associations",
        "[,associations,character,missing,missing-method",
        "[,associations,missing,missing,missing-method",
        "[,associations,numeric,missing,missing-method"
      ]
    },
    {
      "page": "subset-studies",
      "title": "Subset a studies object",
      "topics": [
        "subset-studies",
        "[,studies,character,missing,missing-method",
        "[,studies,missing,missing,missing-method",
        "[,studies,numeric,missing,missing-method"
      ]
    },
    {
      "page": "subset-traits",
      "title": "Subset a traits object",
      "topics": [
        "subset-traits",
        "[,traits,character,missing,missing-method",
        "[,traits,missing,missing,missing-method",
        "[,traits,numeric,missing,missing-method"
      ]
    },
    {
      "page": "subset-variants",
      "title": "Subset a variants object",
      "topics": [
        "subset-variants",
        "[,variants,character,missing,missing-method",
        "[,variants,missing,missing,missing-method",
        "[,variants,numeric,missing,missing-method"
      ]
    },
    {
      "page": "trait_to_association",
      "title": "Map an EFO trait id to an association id",
      "topics": [
        "trait_to_association"
      ]
    },
    {
      "page": "trait_to_study",
      "title": "Map an EFO trait id to a study id",
      "topics": [
        "trait_to_study"
      ]
    },
    {
      "page": "trait_to_variant",
      "title": "Map an EFO trait id to a variant id",
      "topics": [
        "trait_to_variant"
      ]
    },
    {
      "page": "traits-class",
      "title": "An S4 class to represent a set of GWAS Catalog EFO traits.",
      "topics": [
        "traits-class"
      ]
    },
    {
      "page": "variant_to_association",
      "title": "Map a variant id to an association id",
      "topics": [
        "variant_to_association"
      ]
    },
    {
      "page": "variant_to_study",
      "title": "Map a variant id to a study id",
      "topics": [
        "variant_to_study"
      ]
    },
    {
      "page": "variant_to_trait",
      "title": "Map a variant id to an EFO trait",
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        "variant_to_trait"
      ]
    },
    {
      "page": "variants-class",
      "title": "An S4 class to represent a set of GWAS Catalog variants",
      "topics": [
        "variants-class"
      ]
    },
    {
      "page": "write_xlsx",
      "title": "Export a GWAS Catalog object to xlsx",
      "topics": [
        "write_xlsx"
      ]
    }
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